The highest decisive body of the EAS is the general meeting. Between meetings the EAS is managed by the management board. At least 2/3 of members of the management board need to be full members. Only a full member can become the chairman of the management board.
Since December, 2015 the management board consists of Kati Ok (chairperson), Jaanus Sibul, Tarmo Koll, Lagle Sammelsaar.
Past chairmen have been Tarmo Koll (1999-2005 and 2012-2014) and Jaanus Sibul (2005-2008), Marika Guralnik (2008-2011).